Principles Of Bioenergetics

13.1 Bioenergetics and Thermodynamics 490

13.2 Phosphoryl Group Transfers and ATP 496

13.3 Biological Oxidation-Reduction Reactions 507

The total energy of the universe is constant; the total entropy is continually increasing.

—Rudolf Clausius, The Mechanical Theory of Heat with Its Applications to the Steam-Engine and to the Physical Properties of Bodies, 1865 (trans. 1867)

The isomorphism of entropy and information establishes a link between the two forms of power: the power to do and the power to direct what is done.

—François Jacob, La logique du vivant: une histoire de l'hérédité (The Logic of Life: A History of Heredity), 1970

Living cells and organisms must perform work to stay alive, to grow, and to reproduce. The ability to harness energy and to channel it into biological work is a fundamental property of all living organisms; it must have been acquired very early in cellular evolution. Modern organisms carry out a remarkable variety of energy transductions, conversions of one form of energy to another. They use the chemical energy in fuels to bring about the synthesis of complex, highly ordered macro-molecules from simple precursors. They also convert the chemical energy of fuels into concentration gradients and electrical gradients, into motion and heat, and, in a few organisms such as fireflies and some deep-sea fish, into light. Photosynthetic organisms transduce light energy into all these other forms of energy.

The chemical mechanisms that underlie biological energy transductions have fascinated and challenged biologists for centuries. Antoine Lavoisier, before he lost his head in the French Revolution, recognized that animals somehow transform chemical fuels (foods) into heat and that this process of respiration is essential to life. He observed that

... in general, respiration is nothing but a slow combustion of carbon and hydrogen, which is entirely similar to that which occurs in a lighted lamp or candle, and that, from this point of view, animals that respire are true combustible bodies that burn and consume themselves . . . One may say that this analogy between combustion and respiration has not escaped the notice of the poets, or rather the philosophers of antiquity, and which they had expounded and interpreted. This fire stolen from heaven, this torch of Prometheus, does not only represent an ingenious and poetic idea, it is a faithful picture of the operations of nature, at least for animals that breathe; one may therefore say, with the ancients, that the torch of life lights itself at the moment the infant breathes for the first time, and it does not extinguish itself except at death.

In this century, biochemical studies have revealed much of the chemistry underlying that "torch of life." Biological energy transductions obey the same physical laws that govern all other natural processes. It is therefore essential for a student of biochemistry to understand these laws and how they apply to the flow of energy in the biosphere. In this chapter we first review the laws of thermodynamics and the quantitative relationships among free energy, enthalpy, and entropy. We then describe the special role of ATP in biological

*From a memoir by Armand Seguin and Antoine Lavoisier, dated 1789, quoted in Lavoisier, A. (1862) Oeuvres de Lavoisier, Imprimerie Impériale, Paris.

Antoine Lavoisier, 1743-1794

energy exchanges. Finally, we consider the importance of oxidation-reduction reactions in living cells, the energetics of electron-transfer reactions, and the electron carriers commonly employed as cofactors of the enzymes that catalyze these reactions.

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