1. Cantor, C.R.; Smith, C.L. Genomics; Wiley & Sons, Inc.: New York, 1999; 74.

2. Roberts, R.W.; Crothers, D.M. Specificity and stringency in DNA triplex formation. Proc. Natl. Acad. Sci. U. S. A. 19. 1991, 88 (21), 9397-9401.

3. Bonnet, G.; Tyagi, S.; Libchaber, A.; Kramer, F.R. Thermodynamic basis of the enhanced specificity of structured DNA probes. Proc. Natl. Acad. Sci. U. S. A. 20. 1999, 96 (11), 6171-6176.

4. Tyagi, S.; Kramer, F.R. Molecular beacons: Probes that fluoresce upon hybridization. Nat. Biotechnol. 1996, 14 (3), 303-308. 21.

5. Tyagi, S.; Bratu, D.P.; Kramer, F.R. Multicolor molecular beacons for allele discrimination. Nat. Biotechnol. 1998, 16 (1), 49-53.

6. Broude, N.E. Stem-loop oligonucleotides: A robust tool for molecular biology and biotechnology. Trends Biotech. 22. 2002, 20 (6), 249-256.

7. Vet, J.A.; Van der Rijt, B.J.; Blom, H.J. Molecular beacons: Colorful analysis of nucleic acids. Expert Rev. Mol. Diagn. 2002, 2 (1), 77-86. 23.

8. Du, H.; Disney, M.D.; Miller, B.L.; Krauss, T.D. Hybridization-based unquenching of DNA hairpins on Au surfaces: Prototypical ''molecular beacon'' biosensors. J. Am. Chem. Soc. 2003, 125 (14), 4012-4013. 24.

9. Fan, C.; Plaxco, K.W.; Heeger, A.J. Electrochemical interrogation of conformational changes as a reagentless method for the sequence-specific detection of DNA. Proc. Natl. Acad. Sci. U. S. A. 2003, 100 (16), 9134-9137. 25.

10. Livak, K.J.; Flood, S.J.; Marmaro, J.; Giusti, W.; Deetz, K. Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization. PCR Methods 26. Appl. 1995, 4 (6), 357-362.

11. Kuhn, H.; Demidov, V.V.; Coull, J.M.; Fiandaca, M.J.; Gildea, B.D.; Frank-Kamenetskii, M.D. Hybridization of DNA and PNA molecular beacons to single-stranded and double-stranded DNA targets. J. Am. Chem. Soc. 2002, 27. 124 (6), 1097-1103.

12. Demidov, V.V. PD-loop technology: PNA openers at work. Expert Rev. Mol. Diagn. 2001, 1 (3), 343-351.

Nutiu, R.; Li, Y. Tripartite molecular beacons. Nucleic Acids Res. 2002, 130 (18), e94.

Tsourkas, A.; Behlke, M.A.; Bao, G. Hybridization of 2'-O-methyl and 2'-deoxy molecular beacons to RNA and DNA targets. Nucleic Acids Res. 2003, 30 (23), 51685174.

Stojanovic, M.N.; de Prada, P.; Landry, D.W. Catalytic molecular beacons. Chembiochemistry 2001, 2 (6), 411415.

Bukanov, N.O.; Demidov, V.V.; Nielsen, P.E.; Frank-Kamenetskii, M.D. PD-loop: A complex of duplex DNA with an oligonucleotide. Proc. Natl. Acad. Sci. U. S. A. 1998, 95 (10), 5516-5520.

Solinas, A.; Brown, L.J.; McKeen, C.; Mellor, J.M.; Nicol, J.; Thelwell, N.; Brown, T. Duplex scorpion primers in SNP analysis and FRET applications. Nucleic Acids Res.

Kaboev, O.K.; Luchkina, L.A.; Tret'iakov, A.N.; Bahrmand, A.R. PCR hot start using primers with the structure of molecular beacons (hairpin-like structure). Nucleic Acids Res. 2000, 28 (21), e94. Ronaghi, M.; Pettersson, B.; Uhlen, M.; Nyren, P. PCR-introduced loop structure as primer in DNA sequencing. BioTechniques 1998, 25 (5), pp. 876-878, 880-882, 884.

Siebert, P.D.; Chenchik, A.; Kellog, D.E.; Lukyanov, K.A.; Lukyanov, S.A. An improved PCR method for walking in uncloned genomic DNA. Nucleic Acids Res. 1995, 23 (6), 1087-1088.

Lukyanov, K.A.; Launer, G.A.; Tarabykin, V.S.; Zaraisky, A.G.; Lukyanov, S.A. Inverted terminal repeats permit the average length of amplified DNA fragments to be regulated during preparation of cDNA libraries by polymerase chain reaction. Anal. Biochem. 1995, 229 (2), 198-202. Kaur, M.; Makrigiorgos, M. Novel amplification of DNA in hairpin structure: Towards a radical elimination of PCR errors from amplified DNA. Nucleic Acids Res. 2003, 31 (6), e26.

Notomi, T.; Okayama, H.; Masubuchi, H.; Yonekawa, T.; Watanabe, K.; Amino, N.; Hase, T. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 2000, 28 (12), e63.

Nagamine, K.; Kuzuhara, Y.; Notomi, T. Isolation of single-stranded DNA from loop-mediated isothermal amplification products. Biochem. Biophys. Res. Commun.

Broude, N.E.; Woodward, K.; Cavallo, R.; Cantor, C.R.; Englert, D. DNA microarrays with stem-loop DNA probes: Preparation and applications. Nucleic Acids Res. 2001, 29 (19), e92.

Wang, J.; Bai, Y.; Li, T.; Lu, Z. DNA microarrays with unimolecular hairpin double-stranded DNA probes: fabrication and exploration of sequence-specific DNA/protein interactions. J. Biochem. Biophys. Methods 2003, 55 (3), 215-232.

Riccelli, P.V.; Mandell, K.E.; Benight, A.S Melting studies of dangling-ended DNA hairpins: effects of end length, loop sequence and biotinylation of loop bases. Nucleic Acids Res 2002, 30 (18), 4088-4093.

Was this article helpful?

0 0
Getting Started With Dumbbells

Getting Started With Dumbbells

The use of dumbbells gives you a much more comprehensive strengthening effect because the workout engages your stabilizer muscles, in addition to the muscle you may be pin-pointing. Without all of the belts and artificial stabilizers of a machine, you also engage your core muscles, which are your body's natural stabilizers.

Get My Free Ebook

Post a comment